Package: etm 1.1.2

etm: Empirical Transition Matrix

The etm (empirical transition matrix) package permits to estimate the matrix of transition probabilities for any time-inhomogeneous multi-state model with finite state space using the Aalen-Johansen estimator. Functions for data preparation and for displaying are also included (Allignol et al., 2011 <doi:10.18637/jss.v038.i04>). Functionals of the Aalen-Johansen estimator, e.g., excess length-of-stay in an intermediate state, can also be computed (Allignol et al. 2011 <doi:10.1007/s00180-010-0200-x>).

Authors:Arthur Allignol [aut], Mark Clements [cre, aut]

etm_1.1.2.tar.gz
etm_1.1.2.zip(r-4.7)etm_1.1.2.zip(r-4.6)etm_1.1.2.zip(r-4.5)
etm_1.1.2.tgz(r-4.6-x86_64)etm_1.1.2.tgz(r-4.6-arm64)etm_1.1.2.tgz(r-4.5-x86_64)etm_1.1.2.tgz(r-4.5-arm64)
etm_1.1.2.tar.gz(r-4.7-arm64)etm_1.1.2.tar.gz(r-4.7-x86_64)etm_1.1.2.tar.gz(r-4.6-arm64)etm_1.1.2.tar.gz(r-4.6-x86_64)
etm_1.1.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
card.svg |card.png
etm/json (API)

# Install 'etm' in R:
install.packages('etm', repos = c('https://mclements.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/mclements/etm/issues

Uses libs:
  • openblas– Optimized BLAS
  • c++– GNU Standard C++ Library v3
Datasets:
  • abortion - Pregnancies exposed to coumarin derivatives
  • fourD - Placebo data from the 4D study
  • los.data - Length of hospital stay
  • sir.cont - Ventilation status in intensive care unit patients

On CRAN:

Conda:

openblascpp

8.50 score 16 packages 122 scripts 11k downloads 17 mentions 12 exports 6 dependencies

Last updated from:f9ff9b4552. Checks:13 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-arm64OK206
linux-devel-x86_64OK179
source / vignettesOK223
linux-release-arm64OK167
linux-release-x86_64OK176
macos-release-arm64OK140
macos-release-x86_64OK202
macos-oldrel-arm64OK142
macos-oldrel-x86_64OK258
windows-develOK176
windows-releaseOK161
windows-oldrelOK193
wasm-releaseOK114

Exports:closclosPseudoetmetmCIFetmprepprepare.los.datatra_comptra_illtra_ill_comptra_survtrcovtrprob

Dependencies:data.tablelatticeMatrixRcppRcppArmadillosurvival

Computing Cumulative Incidence Functions with the etmCIF Function

Rendered frometmCIF_tutorial.Rnwusingutils::Sweaveon Jun 01 2026.

Last update: 2020-09-02
Started: 2020-09-02